Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Gm27501-201ENSMUST00000183599 107 ntBASIC15.35■□□□□ 0.05
E4f1Q8CCE9 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Gm45930-201ENSMUST00000221330 292 ntBASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
E4f1Q8CCE9 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12403-201ENSMUST00000121384 959 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Gm10268-201ENSMUST00000085340 555 ntBASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
E4f1Q8CCE9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
E4f1Q8CCE9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Gm43822-201ENSMUST00000200285 476 ntBASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Snora73a-201ENSMUST00000082453 205 ntBASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
E4f1Q8CCE9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
E4f1Q8CCE9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
E4f1Q8CCE9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
E4f1Q8CCE9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 145.8 ms