Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.65□□□□□ -0.38
SynpoQ8CC35 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm29649-201ENSMUST00000185649 419 ntBASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm45784-201ENSMUST00000188360 142 ntBASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.65□□□□□ -0.38
SynpoQ8CC35 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SynpoQ8CC35 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
SynpoQ8CC35 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SynpoQ8CC35 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.65□□□□□ -0.39
SynpoQ8CC35 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm13226-201ENSMUST00000117838 404 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm43630-201ENSMUST00000201550 776 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Gm24447-201ENSMUST00000083977 338 ntBASIC12.64□□□□□ -0.39
SynpoQ8CC35 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SynpoQ8CC35 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Gm15770-201ENSMUST00000117498 584 ntBASIC12.63□□□□□ -0.39
SynpoQ8CC35 Gm13612-201ENSMUST00000119276 390 ntBASIC12.63□□□□□ -0.39
SynpoQ8CC35 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Gm6091-201ENSMUST00000098307 165 ntBASIC12.63□□□□□ -0.39
SynpoQ8CC35 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SynpoQ8CC35 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms