Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Gm5385-201ENSMUST00000118988 1559 ntBASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc60Q8C4J0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Gm7029-201ENSMUST00000173226 450 ntBASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc60Q8C4J0 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gm11425-201ENSMUST00000119608 498 ntBASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gm5186-201ENSMUST00000218781 920 ntBASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Gm9396-201ENSMUST00000076703 567 ntBASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc60Q8C4J0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm2231-201ENSMUST00000125661 612 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm9061-201ENSMUST00000182707 1006 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm27682-201ENSMUST00000183930 110 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gm40466-201ENSMUST00000212174 422 ntBASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.61■□□□□ 0.25
Ccdc60Q8C4J0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms