Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.24□□□□□ -0.45
Vps9d1Q8C190 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm29667-201ENSMUST00000190817 490 ntBASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.24□□□□□ -0.45
Vps9d1Q8C190 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm12403-201ENSMUST00000121384 959 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Gm17795-201ENSMUST00000214505 757 ntBASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Vps9d1Q8C190 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Vps9d1Q8C190 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms