Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Sh3rf2Q8BZT2 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.21□□□□□ -0.3
Sh3rf2Q8BZT2 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sh3rf2Q8BZT2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Morn2-202ENSMUST00000227729 656 ntBASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.19□□□□□ -0.3
Sh3rf2Q8BZT2 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms