Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cpsf4Q8BQZ5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm8602-201ENSMUST00000184045 607 ntBASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gm29608-201ENSMUST00000190444 463 ntBASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cpsf4Q8BQZ5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12928-201ENSMUST00000117115 573 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12403-201ENSMUST00000121384 959 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm9002-201ENSMUST00000178437 499 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.65□□□□□ -0.38
Cpsf4Q8BQZ5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms