Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Samm50Q8BGH2 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Gm9002-201ENSMUST00000178437 499 ntBASIC15.3■□□□□ 0.04
Samm50Q8BGH2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Rnf17-202ENSMUST00000223627 2077 ntBASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Samm50Q8BGH2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm15371-201ENSMUST00000117057 784 ntBASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm13689-201ENSMUST00000119360 685 ntBASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm5161-201ENSMUST00000075243 853 ntBASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Samm50Q8BGH2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Gm38223-201ENSMUST00000194484 695 ntBASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Gm42550-201ENSMUST00000201553 960 ntBASIC15.28■□□□□ 0.04
Samm50Q8BGH2 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Samm50Q8BGH2 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Samm50Q8BGH2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms