Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm19309-201ENSMUST00000218295 205 ntBASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Pcdh8Q7TSK3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm25927-201ENSMUST00000175058 117 ntBASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm42627-201ENSMUST00000197347 224 ntBASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdh8Q7TSK3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Gm26185-201ENSMUST00000157692 266 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Gm7029-201ENSMUST00000173226 450 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Snora73a-201ENSMUST00000082453 205 ntBASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdh8Q7TSK3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms