Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm45433-201ENSMUST00000209386 247 ntBASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ddx55Q6ZPL9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.77□□□□□ -0.04
Ddx55Q6ZPL9 Gm14921-201ENSMUST00000118643 908 ntBASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Gm19931-201ENSMUST00000198920 368 ntBASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ddx55Q6ZPL9 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm6963-201ENSMUST00000147879 379 ntBASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm16296-201ENSMUST00000159905 325 ntBASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ddx55Q6ZPL9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms