Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rnf220Q6PDX6 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gm45453-201ENSMUST00000211758 853 ntBASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf220Q6PDX6 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm13015-201ENSMUST00000118674 204 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm25911-201ENSMUST00000157621 56 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm9824-201ENSMUST00000178707 561 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Gm5264-201ENSMUST00000190584 848 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf220Q6PDX6 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms