Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Gm4857-201ENSMUST00000192718 785 ntBASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Gm6082-201ENSMUST00000215204 454 ntBASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smchd1Q6P5D8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Morn2-202ENSMUST00000227729 656 ntBASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gm15808-201ENSMUST00000119046 604 ntBASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Mospd4-201ENSMUST00000180618 576 ntBASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Gm8099-201ENSMUST00000200510 742 ntBASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smchd1Q6P5D8 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm24255-201ENSMUST00000104481 128 ntBASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm16296-201ENSMUST00000159905 325 ntBASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm37489-201ENSMUST00000191883 159 ntBASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smchd1Q6P5D8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Smchd1Q6P5D8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.14
Smchd1Q6P5D8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.21□□□□□ -0.14
Smchd1Q6P5D8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.21□□□□□ -0.14
Smchd1Q6P5D8 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smchd1Q6P5D8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms