Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.25□□□□□ -0.29
Sp140Q6NSQ5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Gm44069-201ENSMUST00000204898 506 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Gm8463-201ENSMUST00000208573 613 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Sp140Q6NSQ5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm14928-201ENSMUST00000120198 477 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm12091-201ENSMUST00000146791 830 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm23984-201ENSMUST00000157139 203 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm18018-201ENSMUST00000198273 408 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm18473-201ENSMUST00000220543 868 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm6180-201ENSMUST00000065243 498 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.23□□□□□ -0.29
Sp140Q6NSQ5 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Gm16202-201ENSMUST00000117532 544 ntBASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Sp140Q6NSQ5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms