Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.04□□□□□ -0.48
AtmQ62388 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
AtmQ62388 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
AtmQ62388 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC12.03□□□□□ -0.48
AtmQ62388 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm43520-201ENSMUST00000197996 164 ntBASIC12.03□□□□□ -0.48
AtmQ62388 Gm5340-201ENSMUST00000203733 880 ntBASIC12.03□□□□□ -0.48
AtmQ62388 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.03□□□□□ -0.48
AtmQ62388 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.03□□□□□ -0.48
AtmQ62388 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
AtmQ62388 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.03□□□□□ -0.48
AtmQ62388 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.03□□□□□ -0.48
AtmQ62388 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.03□□□□□ -0.48
AtmQ62388 Gm27530-201ENSMUST00000184096 98 ntBASIC12.03□□□□□ -0.48
AtmQ62388 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.03□□□□□ -0.48
AtmQ62388 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
AtmQ62388 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AtmQ62388 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
AtmQ62388 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Gm15881-201ENSMUST00000148792 942 ntBASIC12.02□□□□□ -0.48
AtmQ62388 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.02□□□□□ -0.48
AtmQ62388 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.02□□□□□ -0.48
AtmQ62388 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
AtmQ62388 Gm5733-201ENSMUST00000190232 939 ntBASIC12.02□□□□□ -0.48
AtmQ62388 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.02□□□□□ -0.48
AtmQ62388 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.02□□□□□ -0.48
AtmQ62388 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
AtmQ62388 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.02□□□□□ -0.48
AtmQ62388 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AtmQ62388 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.02□□□□□ -0.48
AtmQ62388 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
AtmQ62388 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.02□□□□□ -0.49
AtmQ62388 Gm15573-201ENSMUST00000119487 540 ntBASIC12.02□□□□□ -0.49
AtmQ62388 Gm43692-201ENSMUST00000198236 1062 ntBASIC12.02□□□□□ -0.49
AtmQ62388 Gm4482-201ENSMUST00000200876 742 ntBASIC12.02□□□□□ -0.49
AtmQ62388 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
AtmQ62388 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Gm12990-201ENSMUST00000120372 468 ntBASIC12.02□□□□□ -0.49
AtmQ62388 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AtmQ62388 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms