Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Foxc1Q61572 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Foxc1Q61572 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm44241-201ENSMUST00000203230 1662 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Ntrk2-204ENSMUST00000224259 3049 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm7113-201ENSMUST00000120477 958 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm3760-201ENSMUST00000167475 804 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm26763-201ENSMUST00000180968 1093 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Olfr724-202ENSMUST00000213390 1152 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm6562-201ENSMUST00000221903 464 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Olfr1153-201ENSMUST00000052300 957 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.8□□□□□ -0.84
Foxc1Q61572 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC9.8□□□□□ -0.84
Foxc1Q61572 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Foxc1Q61572 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Gm42872-201ENSMUST00000200026 1967 ntBASIC9.79□□□□□ -0.84
Foxc1Q61572 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC9.79□□□□□ -0.84
Foxc1Q61572 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 AC168058.1-201ENSMUST00000219521 2282 ntBASIC9.79□□□□□ -0.84
Foxc1Q61572 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Foxc1Q61572 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Foxc1Q61572 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms