Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.55□□□□□ -0.4
ClpbQ60649 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
ClpbQ60649 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ClpbQ60649 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
ClpbQ60649 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ClpbQ60649 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.54□□□□□ -0.4
ClpbQ60649 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
ClpbQ60649 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Mir7221-201ENSMUST00000184009 72 ntBASIC12.54□□□□□ -0.4
ClpbQ60649 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ClpbQ60649 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.54□□□□□ -0.4
ClpbQ60649 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.54□□□□□ -0.4
ClpbQ60649 Gm26315-201ENSMUST00000083890 321 ntBASIC12.54□□□□□ -0.4
ClpbQ60649 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ClpbQ60649 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
ClpbQ60649 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ClpbQ60649 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ClpbQ60649 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.53□□□□□ -0.4
ClpbQ60649 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
ClpbQ60649 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.53□□□□□ -0.4
ClpbQ60649 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.53□□□□□ -0.4
ClpbQ60649 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.53□□□□□ -0.4
ClpbQ60649 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
ClpbQ60649 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
ClpbQ60649 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.53□□□□□ -0.4
ClpbQ60649 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.53□□□□□ -0.4
ClpbQ60649 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ClpbQ60649 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ClpbQ60649 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClpbQ60649 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.52□□□□□ -0.4
ClpbQ60649 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
ClpbQ60649 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
ClpbQ60649 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
ClpbQ60649 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms