Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Nr1h4Q60641 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.46□□□□□ -0.41
Nr1h4Q60641 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.46□□□□□ -0.41
Nr1h4Q60641 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.46□□□□□ -0.41
Nr1h4Q60641 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.46□□□□□ -0.41
Nr1h4Q60641 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.46□□□□□ -0.41
Nr1h4Q60641 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Nr1h4Q60641 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Nr1h4Q60641 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gm4875-201ENSMUST00000118257 786 ntBASIC12.45□□□□□ -0.42
Nr1h4Q60641 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gm22175-201ENSMUST00000175007 78 ntBASIC12.45□□□□□ -0.42
Nr1h4Q60641 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Nr1h4Q60641 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Nr1h4Q60641 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms