Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Gm10146-201ENSMUST00000072739 309 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Grk6-205ENSMUST00000224653 2976 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.49□□□□□ -0.41
Xrcc1Q60596 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Xrcc1Q60596 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm12384-201ENSMUST00000119228 919 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Mir7085-201ENSMUST00000184353 66 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm45784-201ENSMUST00000188360 142 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm40466-201ENSMUST00000212174 422 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.48□□□□□ -0.41
Xrcc1Q60596 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Xrcc1Q60596 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm14660-201ENSMUST00000119809 575 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm2231-201ENSMUST00000125661 612 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm28693-202ENSMUST00000190758 331 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm19931-201ENSMUST00000198920 368 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.47□□□□□ -0.41
Xrcc1Q60596 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Xrcc1Q60596 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms