Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 CT009711.2-202ENSMUST00000224538 973 ntBASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tsr1Q5SWD9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gm44548-201ENSMUST00000208929 192 ntBASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tsr1Q5SWD9 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Cgrrf1-203ENSMUST00000133989 873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm43703-201ENSMUST00000200523 763 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm6312-201ENSMUST00000204060 1194 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm18944-201ENSMUST00000207672 643 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm34272-201ENSMUST00000208886 253 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Tsr1Q5SWD9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tsr1Q5SWD9 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms