Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm5320-201ENSMUST00000207163 1519 ntBASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm14494-201ENSMUST00000118786 435 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm25948-201ENSMUST00000175334 112 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm18206-201ENSMUST00000207027 926 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm46209-201ENSMUST00000217912 553 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 AC161252.3-201ENSMUST00000225465 1549 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Gm13517-201ENSMUST00000120782 1495 ntBASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav15-1-dv6-1Q5R1D2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Gm37015-201ENSMUST00000192763 1521 ntBASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav15-1-dv6-1Q5R1D2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms