Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Gm45167-201ENSMUST00000208007 322 ntBASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccbe1Q3MI99 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Auts2-212ENSMUST00000178555 309 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Lrtm1-203ENSMUST00000224760 3060 ntBASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Nufip2-204ENSMUST00000181023 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccbe1Q3MI99 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Mir3113-201ENSMUST00000175478 76 ntBASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccbe1Q3MI99 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms