Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Sox4Q06831 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Gm12384-201ENSMUST00000119228 919 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 Gm2231-201ENSMUST00000125661 612 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Gm26185-201ENSMUST00000157692 266 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox4Q06831 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox4Q06831 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox4Q06831 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Gm10268-201ENSMUST00000085340 555 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.84□□□□□ -0.35
Sox4Q06831 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.84□□□□□ -0.35
Sox4Q06831 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Sox4Q06831 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Sox4Q06831 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox4Q06831 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.83□□□□□ -0.35
Sox4Q06831 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox4Q06831 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Sox4Q06831 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox4Q06831 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox4Q06831 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox4Q06831 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.83□□□□□ -0.36
Sox4Q06831 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox4Q06831 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox4Q06831 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox4Q06831 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox4Q06831 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.83□□□□□ -0.36
Sox4Q06831 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sox4Q06831 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox4Q06831 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.83□□□□□ -0.36
Sox4Q06831 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.82□□□□□ -0.36
Sox4Q06831 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox4Q06831 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.82□□□□□ -0.36
Sox4Q06831 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox4Q06831 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 Mir686-201ENSMUST00000102174 109 ntBASIC12.82□□□□□ -0.36
Sox4Q06831 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox4Q06831 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox4Q06831 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.82□□□□□ -0.36
Sox4Q06831 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Sox4Q06831 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.82□□□□□ -0.36
Sox4Q06831 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.82□□□□□ -0.36
Sox4Q06831 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox4Q06831 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms