Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Rprl1-202ENSMUST00000198476 238 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm19269-201ENSMUST00000211401 804 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 AC134860.5-201ENSMUST00000225071 1249 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.93□□□□□ -0.34
Col9a1Q05722 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Col9a1Q05722 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Col9a1Q05722 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Col9a1Q05722 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm12419-201ENSMUST00000116649 636 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm13286-201ENSMUST00000117750 537 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm14791-201ENSMUST00000119061 1166 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Mir6941-201ENSMUST00000184711 59 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm8641-201ENSMUST00000186995 826 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm37666-201ENSMUST00000194110 866 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm17838-201ENSMUST00000205872 876 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm45500-201ENSMUST00000211676 803 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 AC166341.2-201ENSMUST00000220571 120 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 AC242269.1-201ENSMUST00000227020 741 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 AC121357.1-201ENSMUST00000227365 608 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Snora73b-201ENSMUST00000083419 205 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.92□□□□□ -0.34
Col9a1Q05722 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Col9a1Q05722 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col9a1Q05722 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 AC154806.5-202ENSMUST00000227217 1443 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm11451-201ENSMUST00000118946 630 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm13022-201ENSMUST00000121181 285 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm7289-201ENSMUST00000168993 734 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Mir6973a-201ENSMUST00000183646 78 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col9a1Q05722 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Gm44760-201ENSMUST00000206375 1173 ntBASIC12.91□□□□□ -0.34
Col9a1Q05722 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col9a1Q05722 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms