Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.18□□□□□ -0.14
Trim43cP86449 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.18□□□□□ -0.14
Trim43cP86449 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.18□□□□□ -0.14
Trim43cP86449 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim43cP86449 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Trim43cP86449 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.18□□□□□ -0.14
Trim43cP86449 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.18□□□□□ -0.14
Trim43cP86449 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.18□□□□□ -0.14
Trim43cP86449 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trim43cP86449 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm43061-201ENSMUST00000198850 2241 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm12291-201ENSMUST00000121627 311 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Gm11424-201ENSMUST00000121929 829 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm24644-201ENSMUST00000157114 139 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Gm7063-201ENSMUST00000186840 981 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Gm29705-201ENSMUST00000212598 474 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Trim43cP86449 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.17□□□□□ -0.14
Trim43cP86449 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.17□□□□□ -0.14
Trim43cP86449 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trim43cP86449 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.17□□□□□ -0.14
Trim43cP86449 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Trim43cP86449 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trim43cP86449 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Gm11637-201ENSMUST00000120601 592 ntBASIC14.16□□□□□ -0.14
Trim43cP86449 Gm16177-201ENSMUST00000120728 718 ntBASIC14.16□□□□□ -0.14
Trim43cP86449 Gm16479-201ENSMUST00000121706 932 ntBASIC14.16□□□□□ -0.14
Trim43cP86449 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Gm4271-201ENSMUST00000174444 973 ntBASIC14.16□□□□□ -0.14
Trim43cP86449 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Trim43cP86449 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim43cP86449 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim43cP86449 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim43cP86449 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms