Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.3□□□□□ -0.6
Atf1P81269 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.3□□□□□ -0.6
Atf1P81269 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.3□□□□□ -0.6
Atf1P81269 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Mir7654-201ENSMUST00000185082 70 ntBASIC11.3□□□□□ -0.6
Atf1P81269 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.3□□□□□ -0.6
Atf1P81269 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Atf1P81269 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Atf1P81269 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.3□□□□□ -0.6
Atf1P81269 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Atf1P81269 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Atf1P81269 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Atf1P81269 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf1P81269 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Mir6392-201ENSMUST00000184924 108 ntBASIC11.29□□□□□ -0.6
Atf1P81269 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf1P81269 Gm37917-201ENSMUST00000194711 392 ntBASIC11.29□□□□□ -0.6
Atf1P81269 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.29□□□□□ -0.6
Atf1P81269 Itm2b-204ENSMUST00000228637 783 ntBASIC11.29□□□□□ -0.6
Atf1P81269 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atf1P81269 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.29□□□□□ -0.6
Atf1P81269 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Atf1P81269 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Atf1P81269 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Atf1P81269 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.28□□□□□ -0.6
Atf1P81269 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Atf1P81269 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Atf1P81269 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.28□□□□□ -0.6
Atf1P81269 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.28□□□□□ -0.6
Atf1P81269 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Atf1P81269 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms