Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CiitaP79621 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.13□□□□□ -0.15
CiitaP79621 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
CiitaP79621 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CiitaP79621 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.12□□□□□ -0.15
CiitaP79621 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CiitaP79621 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.12□□□□□ -0.15
CiitaP79621 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.12□□□□□ -0.15
CiitaP79621 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.12□□□□□ -0.15
CiitaP79621 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.12□□□□□ -0.15
CiitaP79621 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.12□□□□□ -0.15
CiitaP79621 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.12□□□□□ -0.15
CiitaP79621 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CiitaP79621 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.11□□□□□ -0.15
CiitaP79621 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.11□□□□□ -0.15
CiitaP79621 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.11□□□□□ -0.15
CiitaP79621 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.11□□□□□ -0.15
CiitaP79621 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Gm29396-201ENSMUST00000185659 716 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CiitaP79621 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.11□□□□□ -0.15
CiitaP79621 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.11□□□□□ -0.15
CiitaP79621 Gm8227-201ENSMUST00000223306 571 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CiitaP79621 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.11□□□□□ -0.15
CiitaP79621 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CiitaP79621 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CiitaP79621 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CiitaP79621 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.1□□□□□ -0.15
CiitaP79621 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.1□□□□□ -0.15
CiitaP79621 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.1□□□□□ -0.15
CiitaP79621 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CiitaP79621 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC14.1□□□□□ -0.15
CiitaP79621 Gm27516-201ENSMUST00000184237 98 ntBASIC14.1□□□□□ -0.15
CiitaP79621 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.1□□□□□ -0.15
CiitaP79621 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CiitaP79621 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CiitaP79621 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms