Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.22□□□□□ -0.45
Six5P70178 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.22□□□□□ -0.45
Six5P70178 Gm11803-201ENSMUST00000119966 444 ntBASIC12.22□□□□□ -0.45
Six5P70178 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Gm37922-201ENSMUST00000195596 455 ntBASIC12.22□□□□□ -0.45
Six5P70178 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.22□□□□□ -0.45
Six5P70178 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Six5P70178 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Six5P70178 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.22□□□□□ -0.45
Six5P70178 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.22□□□□□ -0.45
Six5P70178 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Six5P70178 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Six5P70178 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Six5P70178 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.21□□□□□ -0.45
Six5P70178 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Six5P70178 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.21□□□□□ -0.45
Six5P70178 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Six5P70178 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Gm28693-202ENSMUST00000190758 331 ntBASIC12.21□□□□□ -0.45
Six5P70178 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.21□□□□□ -0.45
Six5P70178 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Six5P70178 Gm5035-201ENSMUST00000215581 927 ntBASIC12.21□□□□□ -0.45
Six5P70178 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Six5P70178 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Six5P70178 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Six5P70178 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.21□□□□□ -0.46
Six5P70178 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Six5P70178 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Six5P70178 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.2□□□□□ -0.46
Six5P70178 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.2□□□□□ -0.46
Six5P70178 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Six5P70178 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.2□□□□□ -0.46
Six5P70178 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.2□□□□□ -0.46
Six5P70178 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.2□□□□□ -0.46
Six5P70178 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Six5P70178 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms