Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Gabra1P62812 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Gm5566-201ENSMUST00000116118 459 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Mir7221-201ENSMUST00000184009 72 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC10.97□□□□□ -0.65
Gabra1P62812 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Gm6916-202ENSMUST00000205523 195 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.97□□□□□ -0.65
Gabra1P62812 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
Gabra1P62812 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Gabra1P62812 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.97□□□□□ -0.65
Gabra1P62812 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm13015-201ENSMUST00000118674 204 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm8927-201ENSMUST00000181978 981 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Gm18206-201ENSMUST00000207027 926 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Gabra1P62812 Gm3222-201ENSMUST00000071282 990 ntBASIC10.96□□□□□ -0.65
Gabra1P62812 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Gabra1P62812 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Map1b-203ENSMUST00000223725 2669 ntBASIC10.96□□□□□ -0.66
Gabra1P62812 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.96□□□□□ -0.66
Gabra1P62812 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Gabra1P62812 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC10.96□□□□□ -0.66
Gabra1P62812 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC10.96□□□□□ -0.66
Gabra1P62812 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gabra1P62812 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Gabra1P62812 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Gabra1P62812 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms