Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pdx1P52946 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.91□□□□□ -0.34
Pdx1P52946 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.91□□□□□ -0.34
Pdx1P52946 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdx1P52946 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdx1P52946 Gm12390-201ENSMUST00000117897 397 ntBASIC12.9□□□□□ -0.34
Pdx1P52946 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Pdx1P52946 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.9□□□□□ -0.34
Pdx1P52946 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.9□□□□□ -0.34
Pdx1P52946 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.9□□□□□ -0.34
Pdx1P52946 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pdx1P52946 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Pdx1P52946 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.9□□□□□ -0.34
Pdx1P52946 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pdx1P52946 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.9□□□□□ -0.35
Pdx1P52946 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdx1P52946 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.9□□□□□ -0.35
Pdx1P52946 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pdx1P52946 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pdx1P52946 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdx1P52946 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.89□□□□□ -0.35
Pdx1P52946 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Gm29649-201ENSMUST00000185649 419 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.89□□□□□ -0.35
Pdx1P52946 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.89□□□□□ -0.35
Pdx1P52946 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 Gm10146-201ENSMUST00000072739 309 ntBASIC12.89□□□□□ -0.35
Pdx1P52946 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pdx1P52946 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Pdx1P52946 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms