Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Brca1P48754 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Brca1P48754 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Gm15711-201ENSMUST00000118889 535 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Gm12196-201ENSMUST00000120954 262 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.36□□□□□ -0.11
Brca1P48754 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Brca1P48754 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Gm1821-202ENSMUST00000227415 750 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Brca1P48754 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC14.36□□□□□ -0.11
Brca1P48754 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Gm9996-201ENSMUST00000070359 913 ntBASIC14.36□□□□□ -0.11
Brca1P48754 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Brca1P48754 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Brca1P48754 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.35□□□□□ -0.11
Brca1P48754 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.35□□□□□ -0.11
Brca1P48754 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Brca1P48754 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Gm7851-201ENSMUST00000117574 323 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Gm15881-201ENSMUST00000148792 942 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Brca1P48754 Rn7s6-201ENSMUST00000175005 291 ntBASIC14.35□□□□□ -0.11
Brca1P48754 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Gm17827-201ENSMUST00000211825 742 ntBASIC14.35□□□□□ -0.11
Brca1P48754 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Brca1P48754 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Brca1P48754 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Brca1P48754 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Brca1P48754 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Brca1P48754 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Brca1P48754 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gm9230-201ENSMUST00000188228 532 ntBASIC14.34□□□□□ -0.11
Brca1P48754 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brca1P48754 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Brca1P48754 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brca1P48754 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Brca1P48754 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Brca1P48754 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms