Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vps4bP46467 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Vps4bP46467 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.27□□□□□ -0.29
Vps4bP46467 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Vps4bP46467 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vps4bP46467 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Gm42612-201ENSMUST00000197986 623 ntBASIC13.26□□□□□ -0.29
Vps4bP46467 Gm43170-201ENSMUST00000199827 612 ntBASIC13.26□□□□□ -0.29
Vps4bP46467 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.26□□□□□ -0.29
Vps4bP46467 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vps4bP46467 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vps4bP46467 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vps4bP46467 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vps4bP46467 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm6447-201ENSMUST00000118905 835 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Gm23984-201ENSMUST00000157139 203 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps4bP46467 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.25□□□□□ -0.29
Vps4bP46467 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vps4bP46467 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vps4bP46467 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms