Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-2P42586 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.96□□□□□ -0.5
Nkx2-2P42586 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkx2-2P42586 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-2P42586 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm12291-201ENSMUST00000121627 311 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm16479-201ENSMUST00000121706 932 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm11424-201ENSMUST00000121929 829 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm24644-201ENSMUST00000157114 139 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm27331-201ENSMUST00000183705 60 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gm29705-201ENSMUST00000212598 474 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-2P42586 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.95□□□□□ -0.5
Nkx2-2P42586 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Gm6091-201ENSMUST00000098307 165 ntBASIC11.94□□□□□ -0.5
Nkx2-2P42586 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nkx2-2P42586 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nkx2-2P42586 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms