Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl28P41105 AC154767.3-201ENSMUST00000225150 1342 ntBASIC8.79□□□□□ -1
Rpl28P41105 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl28P41105 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Rpl28P41105 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Nupl1-206ENSMUST00000225111 2936 ntBASIC8.78□□□□□ -1
Rpl28P41105 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC8.78□□□□□ -1
Rpl28P41105 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC8.78□□□□□ -1
Rpl28P41105 Gm15460-201ENSMUST00000118147 391 ntBASIC8.78□□□□□ -1
Rpl28P41105 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.78□□□□□ -1
Rpl28P41105 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC8.78□□□□□ -1
Rpl28P41105 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC8.78□□□□□ -1
Rpl28P41105 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Gm3436-201ENSMUST00000179930 840 ntBASIC8.78□□□□□ -1
Rpl28P41105 Gm4804-201ENSMUST00000182234 999 ntBASIC8.78□□□□□ -1
Rpl28P41105 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Gm27533-201ENSMUST00000183800 152 ntBASIC8.78□□□□□ -1
Rpl28P41105 AC166997.1-201ENSMUST00000225122 572 ntBASIC8.78□□□□□ -1
Rpl28P41105 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.78□□□□□ -1
Rpl28P41105 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC8.78□□□□□ -1
Rpl28P41105 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC8.78□□□□□ -1
Rpl28P41105 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Gm45667-201ENSMUST00000210380 1316 ntBASIC8.78□□□□□ -1
Rpl28P41105 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Rpl28P41105 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Gm5989-201ENSMUST00000096092 2077 ntBASIC8.77□□□□□ -1
Rpl28P41105 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Rpl28P41105 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm37324-201ENSMUST00000194500 4504 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC8.77□□□□□ -1.01
Rpl28P41105 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm6283-201ENSMUST00000182369 1000 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 Gm21470-201ENSMUST00000187680 696 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC8.77□□□□□ -1.01
Rpl28P41105 AC153872.1-201ENSMUST00000199539 128 ntBASIC8.77□□□□□ -1.01
Rpl28P41105 Gm44344-201ENSMUST00000200287 129 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms