Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 AC154527.2-201ENSMUST00000225256 1466 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Ldha-ps-201ENSMUST00000119390 995 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm18307-201ENSMUST00000206864 949 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
Tnfrsf1aP25118 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Gm28631-201ENSMUST00000190740 334 ntBASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Tnfrsf1aP25118 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1aP25118 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms