Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf9P20334 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf9P20334 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf9P20334 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf9P20334 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm10110-202ENSMUST00000228705 3220 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm14723-201ENSMUST00000118686 215 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm10275-202ENSMUST00000168697 495 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm21147-201ENSMUST00000186046 913 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm38671-201ENSMUST00000200573 130 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 5930422O12Rik-201ENSMUST00000059351 840 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm24526-201ENSMUST00000082921 158 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm10275-201ENSMUST00000092620 635 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf9P20334 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm13689-201ENSMUST00000119360 685 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm18056-201ENSMUST00000207670 568 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm18061-201ENSMUST00000208350 562 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm18063-201ENSMUST00000208529 568 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm18052-201ENSMUST00000208750 559 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Gm6013-201ENSMUST00000212264 699 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 AC125539.1-202ENSMUST00000226449 670 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf9P20334 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms