Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cxcl1P12850 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Pck2-205ENSMUST00000226352 2784 ntBASIC10.8□□□□□ -0.68
Cxcl1P12850 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Gm26464-201ENSMUST00000157094 305 ntBASIC10.8□□□□□ -0.68
Cxcl1P12850 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.8□□□□□ -0.68
Cxcl1P12850 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.8□□□□□ -0.68
Cxcl1P12850 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.8□□□□□ -0.68
Cxcl1P12850 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cxcl1P12850 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm37391-201ENSMUST00000194891 2318 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm6447-201ENSMUST00000118905 835 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm11524-201ENSMUST00000119349 807 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm2213-201ENSMUST00000197485 688 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm19078-201ENSMUST00000206311 727 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC10.79□□□□□ -0.68
Cxcl1P12850 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cxcl1P12850 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 AC139580.1-202ENSMUST00000223574 928 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.79□□□□□ -0.68
Cxcl1P12850 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms