Protein–RNA interactions for Protein: P11276

Fn1, Fibronectin, mousemouse

Known RBP Predictions only

Length 2,477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1P11276 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.94□□□□□ -0.82
Fn1P11276 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Fn1P11276 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC9.94□□□□□ -0.82
Fn1P11276 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC9.94□□□□□ -0.82
Fn1P11276 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC9.94□□□□□ -0.82
Fn1P11276 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC9.94□□□□□ -0.82
Fn1P11276 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Gm27530-201ENSMUST00000184096 98 ntBASIC9.94□□□□□ -0.82
Fn1P11276 Gm43520-201ENSMUST00000197996 164 ntBASIC9.94□□□□□ -0.82
Fn1P11276 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.94□□□□□ -0.82
Fn1P11276 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Fn1P11276 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Fn1P11276 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Fn1P11276 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm12620-201ENSMUST00000119791 1986 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm12612-201ENSMUST00000140182 1986 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC9.93□□□□□ -0.82
Fn1P11276 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.93□□□□□ -0.82
Fn1P11276 CT030135.2-201ENSMUST00000225255 893 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm14314-201ENSMUST00000118225 1015 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm14999-201ENSMUST00000121039 624 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm4726-201ENSMUST00000135604 736 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm6019-201ENSMUST00000148369 736 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC9.93□□□□□ -0.82
Fn1P11276 Gm22144-201ENSMUST00000157402 102 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Fn1P11276 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm44980-201ENSMUST00000205826 314 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC9.93□□□□□ -0.82
Fn1P11276 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Fn1P11276 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Acot6-202ENSMUST00000222921 3622 ntBASIC9.93□□□□□ -0.82
Fn1P11276 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Fn1P11276 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fn1P11276 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fn1P11276 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Fn1P11276 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Fn1P11276 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms