Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm8652-201ENSMUST00000181363 964 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm8602-201ENSMUST00000184045 607 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.16□□□□□ -0.3
Dnmt3aO88508 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Dnmt3aO88508 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.16□□□□□ -0.3
Dnmt3aO88508 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gm8598-201ENSMUST00000221184 836 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Dnmt3aO88508 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Dnmt3aO88508 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Dnmt3aO88508 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Dnmt3aO88508 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dnmt3aO88508 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.14□□□□□ -0.31
Dnmt3aO88508 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.14□□□□□ -0.31
Dnmt3aO88508 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dnmt3aO88508 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dnmt3aO88508 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.14□□□□□ -0.31
Dnmt3aO88508 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Dnmt3aO88508 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.14□□□□□ -0.31
Dnmt3aO88508 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.14□□□□□ -0.31
Dnmt3aO88508 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Dnmt3aO88508 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC13.14□□□□□ -0.31
Dnmt3aO88508 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms