Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.16□□□□□ -0.3
Chrna4O70174 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.16□□□□□ -0.3
Chrna4O70174 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Mir686-201ENSMUST00000102174 109 ntBASIC13.16□□□□□ -0.3
Chrna4O70174 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Gm12203-201ENSMUST00000118235 598 ntBASIC13.16□□□□□ -0.3
Chrna4O70174 Gm12209-201ENSMUST00000120089 596 ntBASIC13.16□□□□□ -0.3
Chrna4O70174 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chrna4O70174 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.16□□□□□ -0.3
Chrna4O70174 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
Chrna4O70174 Gm24196-201ENSMUST00000179161 110 ntBASIC13.16□□□□□ -0.3
Chrna4O70174 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Gm27839-201ENSMUST00000184242 106 ntBASIC13.16□□□□□ -0.3
Chrna4O70174 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.16□□□□□ -0.3
Chrna4O70174 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chrna4O70174 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chrna4O70174 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chrna4O70174 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chrna4O70174 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm13369-201ENSMUST00000119442 987 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Gm11814-201ENSMUST00000119515 929 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.15□□□□□ -0.3
Chrna4O70174 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.15□□□□□ -0.3
Chrna4O70174 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Chrna4O70174 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chrna4O70174 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.15□□□□□ -0.3
Chrna4O70174 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chrna4O70174 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Chrna4O70174 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.14□□□□□ -0.31
Chrna4O70174 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chrna4O70174 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chrna4O70174 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.14□□□□□ -0.31
Chrna4O70174 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.14□□□□□ -0.31
Chrna4O70174 Gm11478-201ENSMUST00000117851 599 ntBASIC13.14□□□□□ -0.31
Chrna4O70174 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.14□□□□□ -0.31
Chrna4O70174 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chrna4O70174 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Chrna4O70174 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chrna4O70174 Gm37922-201ENSMUST00000195596 455 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms