Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Mir6392-201ENSMUST00000184924 108 ntBASIC14.01□□□□□ -0.17
Nr1i3O35627 Gm37917-201ENSMUST00000194711 392 ntBASIC14.01□□□□□ -0.17
Nr1i3O35627 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.01□□□□□ -0.17
Nr1i3O35627 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.01□□□□□ -0.17
Nr1i3O35627 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Nr1i3O35627 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.01□□□□□ -0.17
Nr1i3O35627 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nr1i3O35627 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Nr1i3O35627 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Gm43677-201ENSMUST00000198098 2378 ntBASIC14□□□□□ -0.17
Nr1i3O35627 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Gm13813-201ENSMUST00000120998 787 ntBASIC14□□□□□ -0.17
Nr1i3O35627 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14□□□□□ -0.17
Nr1i3O35627 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14□□□□□ -0.17
Nr1i3O35627 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Nr1i3O35627 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Gm9061-201ENSMUST00000182707 1006 ntBASIC14□□□□□ -0.17
Nr1i3O35627 Gm42929-201ENSMUST00000198374 1286 ntBASIC14□□□□□ -0.17
Nr1i3O35627 AC125117.1-201ENSMUST00000228121 468 ntBASIC14□□□□□ -0.17
Nr1i3O35627 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nr1i3O35627 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Nr1i3O35627 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nr1i3O35627 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.99□□□□□ -0.17
Nr1i3O35627 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Gm12291-201ENSMUST00000121627 311 ntBASIC13.99□□□□□ -0.17
Nr1i3O35627 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.99□□□□□ -0.17
Nr1i3O35627 Gm6458-201ENSMUST00000211573 635 ntBASIC13.99□□□□□ -0.17
Nr1i3O35627 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.99□□□□□ -0.17
Nr1i3O35627 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nr1i3O35627 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nr1i3O35627 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms