Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.75□□□□□ -0.37
Npc1O35604 Gm14660-201ENSMUST00000119809 575 ntBASIC12.75□□□□□ -0.37
Npc1O35604 Gm12209-201ENSMUST00000120089 596 ntBASIC12.75□□□□□ -0.37
Npc1O35604 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Mir7085-201ENSMUST00000184353 66 ntBASIC12.75□□□□□ -0.37
Npc1O35604 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.75□□□□□ -0.37
Npc1O35604 Gm37497-201ENSMUST00000195830 798 ntBASIC12.75□□□□□ -0.37
Npc1O35604 Gm45841-201ENSMUST00000207700 164 ntBASIC12.75□□□□□ -0.37
Npc1O35604 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Npc1O35604 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.75□□□□□ -0.37
Npc1O35604 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Npc1O35604 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.75□□□□□ -0.37
Npc1O35604 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Npc1O35604 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Npc1O35604 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Npc1O35604 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Npc1O35604 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Npc1O35604 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.74□□□□□ -0.37
Npc1O35604 Gm14350-201ENSMUST00000116642 640 ntBASIC12.74□□□□□ -0.37
Npc1O35604 Gm6447-201ENSMUST00000118905 835 ntBASIC12.74□□□□□ -0.37
Npc1O35604 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.74□□□□□ -0.37
Npc1O35604 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.74□□□□□ -0.37
Npc1O35604 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.74□□□□□ -0.37
Npc1O35604 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.74□□□□□ -0.37
Npc1O35604 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.74□□□□□ -0.37
Npc1O35604 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.74□□□□□ -0.37
Npc1O35604 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.74□□□□□ -0.37
Npc1O35604 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Npc1O35604 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.74□□□□□ -0.37
Npc1O35604 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.74□□□□□ -0.37
Npc1O35604 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.74□□□□□ -0.37
Npc1O35604 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Npc1O35604 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Npc1O35604 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Npc1O35604 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Npc1O35604 Gm12742-201ENSMUST00000117326 410 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Npc1O35604 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.73□□□□□ -0.37
Npc1O35604 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.73□□□□□ -0.37
Npc1O35604 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms