Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdh17E9PXF0 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gm25927-201ENSMUST00000175058 117 ntBASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Pcdh17E9PXF0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm2231-201ENSMUST00000125661 612 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm25261-201ENSMUST00000157416 134 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Pcdh17E9PXF0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh17E9PXF0 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms