Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Hfm1D3Z4R1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm5525-201ENSMUST00000190438 1312 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Mir874-201ENSMUST00000104769 76 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm13888-201ENSMUST00000119148 422 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm12196-201ENSMUST00000120954 262 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm17827-201ENSMUST00000211825 742 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 AC133602.1-201ENSMUST00000227510 509 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 AC123619.2-202ENSMUST00000225097 1568 ntBASIC18■□□□□ 0.47
Hfm1D3Z4R1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Hfm1D3Z4R1 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Gm6781-201ENSMUST00000038304 1242 ntBASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Hfm1D3Z4R1 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm45550-201ENSMUST00000209380 946 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Ginm1-202ENSMUST00000065124 300 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm22133-201ENSMUST00000102082 109 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm11989-201ENSMUST00000117240 672 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm11362-201ENSMUST00000118838 850 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm5778-201ENSMUST00000171003 1072 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Mir7686-201ENSMUST00000200604 57 ntBASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hfm1D3Z4R1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Hfm1D3Z4R1 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms