Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc194A0A140LIT1 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13□□□□□ -0.33
Ccdc194A0A140LIT1 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm42612-201ENSMUST00000197986 623 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm43170-201ENSMUST00000199827 612 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Gm7730-201ENSMUST00000212486 454 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccdc194A0A140LIT1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccdc194A0A140LIT1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms