Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.58□□□□□ -0.4
Cldn9Q9Z0S7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cldn9Q9Z0S7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Gm28911-201ENSMUST00000188837 117 ntBASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cldn9Q9Z0S7 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cldn9Q9Z0S7 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms