Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Smco4Q9JIS3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.42□□□□□ -0.74
Smco4Q9JIS3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Gm29741-201ENSMUST00000192667 421 ntBASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco4Q9JIS3 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Gm12644-201ENSMUST00000119935 606 ntBASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Gm7063-201ENSMUST00000186840 981 ntBASIC10.41□□□□□ -0.74
Smco4Q9JIS3 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 AC153889.1-201ENSMUST00000219257 330 ntBASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.41□□□□□ -0.74
Smco4Q9JIS3 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms