Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.54□□□□□ -0.4
Ube4bQ9ES00 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Ube4bQ9ES00 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Gm15957-201ENSMUST00000118893 974 ntBASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.53□□□□□ -0.4
Ube4bQ9ES00 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Ube4bQ9ES00 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ube4bQ9ES00 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.52□□□□□ -0.41
Ube4bQ9ES00 Gm18889-201ENSMUST00000174284 929 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms