Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Gm6973-201ENSMUST00000117080 721 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Gm15427-201ENSMUST00000117288 531 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Gm9727-201ENSMUST00000161387 555 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hmg20aQ9DC33 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gm12260-201ENSMUST00000122447 411 ntBASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Hmg20aQ9DC33 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Gm1401-201ENSMUST00000122048 772 ntBASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hmg20aQ9DC33 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms