Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chmp4bQ9D8B3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm13612-201ENSMUST00000119276 390 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm38671-201ENSMUST00000200573 130 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gm7287-201ENSMUST00000205267 602 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chmp4bQ9D8B3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gm11918-201ENSMUST00000121660 179 ntBASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gm6180-201ENSMUST00000065243 498 ntBASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chmp4bQ9D8B3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Chmp4bQ9D8B3 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.46■□□□□ 0.22
Chmp4bQ9D8B3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Ighv8-10-201ENSMUST00000199579 358 ntBASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Gm17794-201ENSMUST00000220252 955 ntBASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chmp4bQ9D8B3 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms