Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 AW822252-206ENSMUST00000208904 237 ntBASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.28□□□□□ -0.44
Chaf1bQ9D0N7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Chaf1bQ9D0N7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Gm12585-201ENSMUST00000117307 290 ntBASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.27□□□□□ -0.45
Chaf1bQ9D0N7 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Gm5425-201ENSMUST00000214125 459 ntBASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.26□□□□□ -0.45
Chaf1bQ9D0N7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms