Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm6447-201ENSMUST00000118905 835 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm14928-201ENSMUST00000120198 477 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm23984-201ENSMUST00000157139 203 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Khdc3Q9CWU5 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Khdc3Q9CWU5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Itm2b-204ENSMUST00000228637 783 ntBASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Gm6180-201ENSMUST00000065243 498 ntBASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Khdc3Q9CWU5 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms